01 / Protein
Protein, peptide & de-novo design
Rational engineering of mutants, fusions and fragments — solubility, stability, glycosylation, IP position. Increasingly built around AI methods: AlphaFold, RFdiffusion, ProteinMPNN, ESM-based scoring.
- Variant & fusion design
- De novo binders
- Epitope & antigen engineering
- Developability assessment
02 / mRNA & Vaccines
Vaccine & mRNA platform engineering
Reverse vaccinology pipelines, antigen and epitope selection, HLA and strain coverage, population centroid design. Tissue-specific bicodon optimization and UTR selection for proprietary mRNA platforms.
- Computational vaccinology
- T-cell & B-cell epitope prediction
- Codon & UTR optimization
- Cross-strain antigen design
03 / AI & ML
Custom AI & ML for biology
Bespoke model development where off-the-shelf tools fall short — from fine-tuning protein language models to building scoring functions, prediction pipelines and agentic workflows around your data.
- Protein language models
- Custom scoring & ranking
- LLM/agentic R&D workflows
- Benchmarking & validation
04 / Data & Cloud
Data integration & AWS infrastructure
Heterogeneous biomedical data — PubMed, MeSH, drug and target databases, patent full-text — woven into queryable graphs and pipelines. Optional setup of reproducible AWS environments for compute-heavy work.
- Bio-data warehousing
- Knowledge graphs
- Reproducible pipelines
- AWS / GPU compute setup
05 / Strategy & IP
Strategic consulting, IP & reviews
Translating bioinformatic results into biomedical decisions. IP background and freedom-to-operate searches, custom literature reviews, drug repositioning via protein/drug/disease networks.
- Decision support
- Literature & IP landscape
- Drug repositioning
- Method scope & utility advice
06 / Scoped project
Start with a small, scoped engagement.
A specific question, a few days, a concrete deliverable — a low-stakes way to see how we work together before any larger commitment. Even a short engagement is done transparently and documented: nothing is a black box. You can take the process in-house if and when it makes sense for you, or just take the result; both are fine.
- Defined scope
- Fixed budget
- Concrete deliverable
Propose a scoped project →